Insertion junction: CLIP2.039119_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039119
Chromosome:chromosome 13
Location:860681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567400 PDE16 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGATGAGCCCCTCGCGGTGCATCAGGTAGAAGGCCAGAGCCGACAGC
Internal bar code:AGGAAAATTTTTGACGGGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2791
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCCACCAATTATTGAG
Suggested primer 2:GTGTACTCGCCTTGACCCAA