Insertion junction: CLIP2.039121_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039121
Chromosome:chromosome 16
Location:924422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAAGGGCGGGCCACCACTTCCCCAACCGTGGCGGGTTCGACAAGCTA
Internal bar code:TCAGTTATGCCAGGTATTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGCTTACCGTGATCTCC
Suggested primer 2:GTCCCACTCTTTCCTCCTGC