Insertion junction: CLIP2.039123_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039123
Chromosome:chromosome 1
Location:6080721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043000 (1 of 1) PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGGCCGGTGCGCCTGCGCGTGCGAGGGAGGAAGAAGAGGGCGGAGA
Internal bar code:GTGACCGTATGGGAATTCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCGCAATCCCTTCACT
Suggested primer 2:AGGATTCCAGCACCACACAG