Insertion junction: CLIP2.039127_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039127
Chromosome:chromosome 15
Location:826879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640350 CLR4,OPR97,NCL4 Nuclear Control of chloroplast Like 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTCGGGGGCACATCTTCTCCTGGCATGCAGCAGCTAGCAATCCAGC
Internal bar code:ACATTTGGAGCTGTTTCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2098
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCACCACCTTCTGCAG
Suggested primer 2:TGGGCAGAGAGAAAGCACAG