Insertion junction: CLIP2.039128_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039128
Chromosome:chromosome 1
Location:2711100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016450 (1 of 1) IPR000104//IPR001214//IPR002893 - Antifreeze protein, type I // SET domain // Zinc finger, MYND-type; SET domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCACCCAGAATATTCAGCACACCCAGACACGCCGTGTCCAACTTGG
Internal bar code:CTGGAGATCGGTGGTGTGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:59.4203
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTAGGGTCTGTAGGTGA
Suggested primer 2:ACTGCCACTGTAACCGCTAC