Insertion junction: CLIP2.039129_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039129
Chromosome:chromosome 12
Location:3434308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497653 SNE13,NED1 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Putative Cinnamoyl-CoA reductase/flavanone 4-reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCATCTACGGCAACCCGCACGTGTTCGGCAAGGAGCACGTGTACACC
Internal bar code:AATACTGGTGAAAGTATTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3579
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGCTGCTGGTTCAAG
Suggested primer 2:AGTGGGGATCCGTATTGGGA