Insertion junction: CLIP2.039130_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039130
Chromosome:chromosome 3
Location:1159826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149201 (1 of 1) PTHR10641//PTHR10641:SF655 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCGACCAGGGCGGCGTGGCGCTGCCGCCTTCGCTGATGCAGCAGCA
Internal bar code:ATGGGGCCTATTCTAATTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1704
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAACGGCTCCTCGTCTCT
Suggested primer 2:CCAGCAACTCCAACAACTGC