Insertion junction: CLIP2.039137_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039137
Chromosome:chromosome 3
Location:5527451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185000 GTR8,BGS2,CALS2 Callose synthase 2; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTCCGCAAGTAGCCTCCACAGCAGCAGCCTGCACGAGGGCGCCCCT
Internal bar code:ACCTGGGAGCGGCTAAGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5944
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGAGTGAACATGAGGT
Suggested primer 2:GCAGTCATGGCCAAGAGCTA