Insertion junction: CLIP2.039137_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039137
Chromosome:chromosome 3
Location:5527456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185000 GTR8,BGS2,CALS2 Callose synthase 2; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCGAACAGCCCACCCCGCTTGCTACTGCCGGCGCCGCCGTACACACT
Internal bar code:ACCTGGGAGCGGCTAAGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2261
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCATGGCCAAGAGCTA
Suggested primer 2:CAGGCGAGTGAACATGAGGT