Insertion junction: CLIP2.039142_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039142
Chromosome:chromosome 11
Location:2618137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095082 (1 of 4) PF00956 - Nucleosome assembly protein (NAP) (NAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACGTTTCTCCAGTAATTCTGTTGGCAGCACGGCGGTGCCGACTACG
Internal bar code:CTAAGGAATGAGATACTAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCGATGATGTCTCCGG
Suggested primer 2:CTGTGCGCCTTGCTGTATTC