Insertion junction: CLIP2.039145_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039145
Chromosome:chromosome 17
Location:5792973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTAAACACAAACAAACACGCCCGCTCGCCTCTGTGGCGCCTCGCTCC
Internal bar code:GTTGTCCACCCATTAGTAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4047
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCTCGTCCCCTAATCT
Suggested primer 2:CTCCTGTCGACACACACACA