Insertion junction: CLIP2.039149_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039149
Chromosome:chromosome 14
Location:157888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g608550 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTACTCCTGGCCCCTCCCTGCCCAGGTGTGTGCGAAGTGCGGGCGGC
Internal bar code:GATCCCAAAGTGGTAAAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1184
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGGAGGGTAGAGTGAGT
Suggested primer 2:CTTCGAAGACGCTGCACATG