Insertion junction: CLIP2.039153_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039153
Chromosome:chromosome 9
Location:5714064
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g410500 PAP11 (1 of 1) IPR002934//IPR023214 - Polymerase, nucleotidyl transferase domain // HAD-like domain; Class-II RNA nucleotidyl transferase 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGGACCTGTGCGTGTATTGTGTGTGTGTGTGTGTGCATGTGTGAGC
Internal bar code:TCTTTTAAGACTTATTATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTAAAGGTGGGTGGGC
Suggested primer 2:CTCCTCCTCCTCCTGCTCTT