Insertion junction: CLIP2.039154_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039154
Chromosome:chromosome 11
Location:2017496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467765 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATAATAATGGTGGCGAGGCTGCTGACGTGGACGGTGCCGCCGCCGC
Internal bar code:ATTGGAACCGTGGTCTTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2365
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCATCACCCACCGCTTC
Suggested primer 2:TTCGTCGTCGTTACTGGCAG