Insertion junction: CLIP2.039168_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039168
Chromosome:chromosome 11
Location:3478146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477450 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCATGGTACGTGTCGTGTGGCCGCGTGCGTGCTAGGGAAACTCAAGG
Internal bar code:ATATATAAGTCATATACACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1794
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCACCAACAGTTTTCGGT
Suggested primer 2:GTCAGGCACAAGGGAGAGTC