Insertion junction: CLIP2.039170_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039170
Chromosome:chromosome 9
Location:2181049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395500 HEATR2,HTR2A,HEATR2A,DNAAF5 5-Hydroxytryptamine Receptor 2A; (1 of 3) IPR016024//IPR021133 - Armadillo-type fold // HEAT, type 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTTTACACAGGTCCTGGCGCCAGCACCCCGTACCCGGTGGCACGCG
Internal bar code:AGTTCGAAAAATAAAGTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCAAGAAGGTGGGGG
Suggested primer 2:AGGAAAGAACCAGACGCTCG