Insertion junction: CLIP2.039177_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039177
Chromosome:chromosome 2
Location:3311431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041697
lncRNA_TCONS_00041698

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCTTAGTCGGCCTGGTTGGAAAAGGCAGCTGGCATCCGGTTGCGAT
Internal bar code:ATTTCCGTATCGGTGTACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAATCTCTTCCGGCACA
Suggested primer 2:GTGTTGACACGAAATGCGCT