Insertion junction: CLIP2.039180_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039180
Chromosome:chromosome 1
Location:2492203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800046 (1 of 2) K02218 - casein kinase 1 (CSNK1, CK1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCATATGCGTGGGCGAGAGGTATAATCGGCGCGAATTGTTGCACGGT
Internal bar code:CAAAACCGCAGAAAGTGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1480
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTGCGTGGACATTTCCC
Suggested primer 2:TTCGAGGAGAAGCCCGACTA