Insertion junction: CLIP2.039195_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039195
Chromosome:chromosome 2
Location:1057302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080300 (1 of 5) PTHR10791 - RAG1-ACTIVATING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTGTACGACGTCACTGGAGCCTGCGTGCGTGCCACTGCTTGCGCCG
Internal bar code:GATCAAGTGCGAGGGTATAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2616
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTGCCCATGTCCATAC
Suggested primer 2:GGCTCGGTCACGTTGAGTAG