Insertion junction: CLIP2.039220_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039220
Chromosome:chromosome 12
Location:4715492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522750 GT90F22,GT90-22 GT90 family protein 22; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGTCTCAGGCGGGCCGATGGCATTGGCGGTTACAGTAGTGATTGAGT
Internal bar code:GGATATGTGATTCTGACCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCGACCCTAGCACATAC
Suggested primer 2:GAGTGGGGGAATGAAGGTGG