Insertion junction: CLIP2.039223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039223
Chromosome:chromosome 3
Location:8889973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205361 3'UTR
Cre03.g205473 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCCCACCTCTGAACGCAGTCGTCCCCCGCCGCGGAGGTCGCCTCCA
Internal bar code:TAACTAACGCATATAATCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTACCAATGGCAAGCAT
Suggested primer 2:CGTCACACACACACACACAC