Insertion junction: CLIP2.039223_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039223
Chromosome:chromosome 3
Location:8890425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205361 3'UTR
Cre03.g205473 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTCAGCGCCGTGCGCGTGCCCCATCCCGCAAGCCTACCTAACTCCCG
Internal bar code:TAACTAACGCATATAATCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:734
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCACACACACACACACAC
Suggested primer 2:AGGCTACCAATGGCAAGCAT