Insertion junction: CLIP2.039227_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039227
Chromosome:chromosome 3
Location:7584727
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g204750 (1 of 1) PF12928 - tRNA-splicing endonuclease subunit sen54 N-term (tRNA_int_end_N2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGAGGGGCTGTGCCGCTGCGTGGCTGACGGTTTGTGGAGCTGTCTGC
Internal bar code:ACCATCTGTTATAACTGGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:96
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCAAGGTTCAGCCCAA
Suggested primer 2:ACTTACCCGCGATAAGCCTG