Insertion junction: CLIP2.039227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039227
Chromosome:chromosome 7
Location:2279264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327750 TRP3 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAGATGAGGGCGCGCAGCACCGGCGTGCCGAACACGCTGGGGTGCAC
Internal bar code:GTGATCCAAGCTGGTGACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTAAGTGCGTGCATGGC
Suggested primer 2:ATGTGGTCCACGGTGATGAC