Insertion junction: CLIP2.039230_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039230
Chromosome:chromosome 5
Location:1574896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234700 PYK3 Pyruvate kinase 3; (1 of 2) PTHR11817:SF3 - PYRUVATE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCCCCGTGTGCCTCAACCCGCACGCCCCCACGCCGCGCATCCAGGC
Internal bar code:TGCTTTTGCCGCTTTGAATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2873
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTGGAGGAGGAGGATGT
Suggested primer 2:CACAGCGCTCACGTTTTTGA