Insertion junction: CLIP2.039231_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039231
Chromosome:chromosome 10
Location:676662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422150 (1 of 1) 3.4.16.2 - Lysosomal Pro-Xaa carboxypeptidase / Prolyl carboxypeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCACAACACGTGCCAGCTGCCATTGCAGTCCAGGCACAGGGGCAAG
Internal bar code:CCTTCCTATTTAAAGCAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGGACGTATGGAGCAG
Suggested primer 2:CTCAATGACAGACAGCGGGT