Insertion junction: CLIP2.039232_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039232
Chromosome:chromosome 12
Location:6964501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g561100 (1 of 1) PF00226//PF06839 - DnaJ domain (DnaJ) // GRF zinc finger (zf-GRF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCATAGCTTGGCATCTAAGCAGGTACCGTCCGCCAGCACCACGAGCA
Internal bar code:AGGGTATTGATTACCGTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3523
LEAP-Seq percent confirming:89.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGAGTCTGCAACTGACC
Suggested primer 2:CGTTCTCATCCGCAATGCTG