Insertion junction: CLIP2.039234_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039234
Chromosome:chromosome 12
Location:4730656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522900 LYR4 Complex 1 protein (LYR family); (1 of 10) PF05347 - Complex 1 protein (LYR family) (Complex1_LYR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTCCTTTGCTGACACCAAGGGGCGACAATAACAATCCAGTCAACAG
Internal bar code:ATCGACTGTAAGTATGAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2454
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGCTCTGTTTCACCTCA
Suggested primer 2:GCCTCGTATTCGGCATCTGA