Insertion junction: CLIP2.039238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039238
Chromosome:chromosome 10
Location:1766451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron
Cre10.g801118 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCACACAGGGAGCAGCACACAGGCAGCAGCAGCACTTAAGCAGCAGC
Internal bar code:AGCTCCTCAGCAAAATGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTACCTTGCATGTGAG
Suggested primer 2:GGAAGGTACAGGGGCAAGAC