Insertion junction: CLIP2.039239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039239
Chromosome:chromosome 16
Location:5358847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683450 AGP2 (1 of 4) 2.7.7.27 - Glucose-1-phosphate adenylyltransferase / ADP-glucose synthase; ADP-glucose pyrophosphorylase large subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTACCCGTATGCCGTGTGGCACGCCAGGCGCCACCTGTTGGCACCGG
Internal bar code:GAGTTTTCTCTTGAGGTTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2860
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGCCCTCCTTGTTGAC
Suggested primer 2:CCCCATCAACTCGCCTTTCT