Insertion junction: CLIP2.039239_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039239
Chromosome:chromosome 16
Location:5358860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683450 AGP2 (1 of 4) 2.7.7.27 - Glucose-1-phosphate adenylyltransferase / ADP-glucose synthase; ADP-glucose pyrophosphorylase large subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTCGTTCCTTAGCACACACGGTATGCGCTACGTGATATGCAGCCATG
Internal bar code:GTAAGGCATGTACCGTGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:67.3469
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCAACTCGCCTTTCT
Suggested primer 2:TACACGCCCTCCTTGTTGAC