Insertion junction: CLIP2.039240_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039240
Chromosome:chromosome 11
Location:298385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467564 ARL16 ARF-like GTPase; (1 of 1) PTHR11711//PTHR11711:SF11 - ADP RIBOSYLATION FACTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTCCACCCCACCGCCAAGAGTGGACTGCGCGCTGTTCTCTCTGGAT
Internal bar code:GAAACAAAAGGGAAAGCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:356
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGCCACCCAATCCGTTA
Suggested primer 2:ATGCCCGAGCCCAACAAATA