Insertion junction: CLIP2.039242_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039242
Chromosome:chromosome 7
Location:3711026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337850 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCACACCACTACACACACCGCGTCACGCCACTGCCACACCAGTACCA
Internal bar code:AGTCCGTCGGCTAGTATGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1362
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGCAAAGATTGGCACA
Suggested primer 2:TAAGGGACTCGCTCGTACCA