Insertion junction: CLIP2.039243_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039243
Chromosome:chromosome 4
Location:1157453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215700 (1 of 4) IPR009030//IPR011641 - Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGTCAGTGCGTGCGGGGTCGTACGACCATAACACAGTCACACTCAAA
Internal bar code:GGTTAGGGTGTCATCGAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAACCATGCACGTTTGT
Suggested primer 2:AGGGCTTCACACTGGATTCG