Insertion junction: CLIP2.039254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039254
Chromosome:chromosome 16
Location:145624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695218 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATGGGACGGCTGTGTGAGGGGTTGGCATGGCGCGTGCGCTCCATTG
Internal bar code:TTCACCCGACACTGCTGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2960
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACGTGTATGTGGTCGT
Suggested primer 2:GCATTGACAACCTGGCTTGG