Insertion junction: CLIP2.039266_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039266
Chromosome:chromosome 12
Location:1600981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487101 CSV9 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGCGCAGGGTGGCGGCTGGGAGTTGGAGCTCGGGTGGGAGGGGCCC
Internal bar code:ATTTCGCTGTGCCTTGTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4251
LEAP-Seq percent confirming:87.6404
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGCAAATGCCAGCAC
Suggested primer 2:TGTCCTCAACCCATCAAGCC