Insertion junction: CLIP2.039278_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039278
Chromosome:chromosome 3
Location:4941442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179100 UFD1b UFD1b homolog; (1 of 1) PF00789//PF03152 - UBX domain (UBX) // Ubiquitin fusion degradation protein UFD1 (UFD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGAGAGGGCGGTGTTGAAGCGGCGCGGCGTTGCACGGATTCTATACT
Internal bar code:TTTGATGGTCGGGCATGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGAGGTGCGCGTTTTG
Suggested primer 2:CTCATACGTCGGCCACTACC