Insertion junction: CLIP2.039279_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039279
Chromosome:chromosome 10
Location:1319670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427453 CDS
lncRNA_TCONS_00060962 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATGTCGGAGTCAGAGAGCTGCGGCCTTGCTGCGGCCGGCTTGAGCGC
Internal bar code:AATGCGGCTAGGCTTTAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:26.1905
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTCAGGTGATGGGACC
Suggested primer 2:CTCTAGCATCAGAGCGTCGG