Insertion junction: CLIP2.039282_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039282
Chromosome:chromosome 4
Location:686168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217952 (1 of 1) IPR013083//IPR026319 - Zinc finger, RING/FYVE/PHD-type // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCAACCCGGCCCCTGGCCCAGGCCCACCGCTCCGCGATTTCCAGCA
Internal bar code:TGACTTGACTTGTACCAGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACCAAAGCCCCCAACT
Suggested primer 2:AGCGATGTGATGGCTGAACA