Insertion junction: CLIP2.039284_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039284
Chromosome:chromosome 9
Location:4588865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATACACTAGCGGTTCCACTGACTGGCACACTGCGCGGACCGCCAGGC
Internal bar code:ATATGCCACTGCCACAGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTGCACGCGTGAAACTG
Suggested primer 2:TGATGCAAACATTCGGCTGC