Insertion junction: CLIP2.039288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039288
Chromosome:chromosome 10
Location:992175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424750 PPD1 (1 of 2) 2.7.9.1 - Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase; Pyruvate phosphate dikinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCATGTCCTTCATGTGCTTCTCCAGCATGGTCGTGTTGGCGACCAG
Internal bar code:TTCGATGACTATCTAATTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGGAGAGCAGATGTGAT
Suggested primer 2:AACCAATCCCGTGTGTGTGT