Insertion junction: CLIP2.039298_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039298
Chromosome:chromosome 16
Location:7739136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686846 (1 of 1) PTHR22797//PTHR22797:SF40 - CARD6/NUCLEOLAR PROTEIN 3 // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAGGGGCAGCGCGCCCCTGCGGGAAACGTCTGTGGGATGCAGCAGCT
Internal bar code:GTTTGTTAAGTGAGGTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1474
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCGACAACAGTTTTGGC
Suggested primer 2:CCGTATGAGATCACCCTGGC