Insertion junction: CLIP2.039306_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039306
Chromosome:chromosome 3
Location:3956243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGCTCTTCTTGCCTGTTTGTTTCAGCATCTCGACTGCCTCGCCTGCT
Internal bar code:TTTGCCCTCTTTAGGTATGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGTCCTTGATGGTGAG
Suggested primer 2:ACCGTTTACCTCACGAACCC