Insertion junction: CLIP2.039310_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039310
Chromosome:chromosome 7
Location:1269562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322000 CSD2,NIFS2 (1 of 1) PTHR11601//PTHR11601:SF20 - CYSTEINE DESULFURYLASE // SELENOCYSTEINE LYASE; Cysteine desulfurase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGGTTGTAGATACCAGCCCAAACTAAACCAAACCCAATGCAATAG
Internal bar code:TTTACAGAAATATAATATCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCCCCTCTCTCTTGCC
Suggested primer 2:GGTCACAGTCATGCACTCCA