Insertion junction: CLIP2.039318_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039318
Chromosome:chromosome 1
Location:4465208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030550 UBX1 (1 of 1) PTHR13020:SF34 - UBX DOMAIN-CONTAINING PROTEIN 4; possible ubiquitin-proteasome pathway protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAAAACCAAAAGCCATAACGCCATTCGCGCGGCGATGCCAACAAAG
Internal bar code:GATCAGCGTTAACGTGTCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1904
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATGGTAGCATCGGCAT
Suggested primer 2:CACCCGATCGCAAATTCGTC