Insertion junction: CLIP2.039322_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039322
Chromosome:chromosome 5
Location:1549996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234665 AP4B4 Beta4-Adaptin; (1 of 1) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCCTCAGGGGTGGGGGGGAGTGACACCTTTGACGCATGCTAGCGCG
Internal bar code:AGGGGTGAGGGCGGAGTTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGTGCGTGAAACAGG
Suggested primer 2:TTAATAGGTGGACGTGGCGG