Insertion junction: CLIP2.039324_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039324
Chromosome:chromosome 2
Location:7744682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146700 (1 of 1) PF06747 - CHCH domain (CHCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGAACAATCGTGGCCCACCCCAAGCGGCCGAGCGGTTCTCACCCTGC
Internal bar code:TATGTTAGAATTCAGAAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTGCTCCACGAGTGTT
Suggested primer 2:ATGTCGCCGTTGTACTTGGT