Insertion junction: CLIP2.039324_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039324
Chromosome:chromosome 2
Location:7744688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146700 (1 of 1) PF06747 - CHCH domain (CHCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGAAGCGAGGGCACACGGTTGGCCGGCATCTCCCATGCAAAGGCCGG
Internal bar code:CCTGGCGGGATGAGTGAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGCCGTTGTACTTGGT
Suggested primer 2:CTCAGTGCTCCACGAGTGTT