Insertion junction: CLIP2.039325_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039325
Chromosome:chromosome 5
Location:2726460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240500 (1 of 1) PTHR24375:SF140 - ZINC FINGER WITH UFM1-SPECIFIC PEPTIDASE DOMAIN PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAATGCACCGAGTTCCCAGGTTCCCAGCGAAACATCGCGCATGGGG
Internal bar code:TTCTCTAGAGCGAGAGTGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGACGCGGTAGATGAG
Suggested primer 2:AGGCCGAGGCTTAAAACGAA