Insertion junction: CLIP2.039330_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039330
Chromosome:chromosome 7
Location:550087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGATGGGAATGCACTTTGCTGTGCCTGTCTCAAATGTAGATTTCCCGC
Internal bar code:ATCAGGGCGCAAAGGCCTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TATACTGGGTCTGGCGTGGA
Suggested primer 2:GACATCCTTAAACACCGCGC